Publications

Amin Nejatbakhsh, Isabel Garon, Alex H Williams (2023). Estimating Noise Correlations With Wishart Processes. wishart_process.

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Amin Nejatbakhsh, Francesco Fumarola, Saleh Esteki, Taro Toyoizumi, Roozbeh Kiani, Luca Mazzucato (2020). Predicting the Effect of Micro-stimulation on Macaque Prefrontal Activity Based on Spontaneous Circuit Dynamics. FCF.

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Amin Nejatbakhsh, Erdem Varol, Eviatar Yemini, Oliver Hobert, Liam Paninski (2020). Probabilistic Joint Segmentation and Labeling of C. elegans Neurons. Segmentation-Labeling.

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Amin Nejatbakhsh, Erdem Varol, Eviatar Yemini, Vivek Venkatachalam, Albert Lin, Aravi Samuel, Liam Paninski (2020). Deformable Non-negative Matrix Factorization. dNMF.

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Tessa Tekieli, Eviatar Yemini, Amin Nejatbakhsh, Chen Wang, Erdem Varol, Robert W. Fernandez, Neda Masoudi, Liam Paninski, Oliver Hobert (2019). Visualizing the organization and differentiation of the male-specific nervous system of C. elegans. MaleAtlas.

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Gonzalo Mena, Erdem Varol, Amin Nejatbakhsh, Eviatar Yemini, Liam Paninski (2019). Versatile Multiple Object Tracking in Sparse 2D/3D Videos Via Diffeomorphic Image Registration. Zephir.

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Erdem Varol, Amin Nejatbakhsh, Ruoxi Sun, Gonzalo Mena, Eviatar Yemini, Oliver Hobert, Liam Paninski (2019). Statistical Atlas of C. elegans Neurons. StatAtlas.

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Gonzalo Mena, Erdem Varol, Amin Nejatbakhsh, Eviatar Yemini, Liam Paninski (2019). Sinkhorn permutation variational marginal inference. SinkhornVariational.

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Gonzalo Mena, Amin Nejatbakhsh, Erdem Varol, Jonathan Niles Weed (2019). Sinkhorn EM, an expectation-maximization algorithm based on entropic optimal transport. SinkhornEM.

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Eviatar Yemini, Albert Lin, Amin Nejatbakhsh, Erdem Varol, Ruoxi Sun, Gonzalo E. Mena, Aravinthan D.T. Samuel, Liam Paninski, Vivek Venkatachalam, Oliver Hobert (2019). NeuroPAL: a Neuronal Polychromatic Atlas of Landmarks for Whole Brain Imaging in C. elegans. NeuroPAL.

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Ari Pakman, Amin Nejatbakhsh, Dar Gilboa, Abdullah Makkeh, Luca Mazzucato, Michael Wibral, Elad Schneidman (2019). Estimating the unique information of continuous variables. PID.

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Erdem Varol, Amin Nejatbakhsh (2019). Robust Approximate Linear Regression Without Correspondence. rRWOC.

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